COVID19 Data-sets

[jasperblues]

Hi Friends,

If you are interested in doing some modeling of the COVID19 epidemic, here are some datasets that I've found:

Data Sets:

• https://github.com/CSSEGISandData/COVID-19
• https://www.kaggle.com/allen-institute-for-ai/CORD-19-research-challenge

^-- If you're working with knowledge graphs the 2nd might be very interesting.

Research Papers:

• https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0022124

For myself I would love to set up a simulation that runs an epidemic through a sparse social network, and then trial out the effectiveness of some mitigation strategies, however I've been busy with the day job 😉

Maybe it will help someone.

[shan]

I wish there was a dataset of individual cases
. Then we could maybe try to do something like this:

co.vid19.sg

Network Graph Visualisation of Coronavirus Outbreak

Network graph visualising the outbreak, connections, edges and relationships of the COVID-19 infected patients in Singapore.

[jasperblues]

I wish there was a dataset of individual cases

Here you go @shan:

GitHub

CSSEGISandData/COVID-19

Novel Coronavirus (COVID-19) Cases, provided by JHU CSSE - CSSEGISandData/COVID-19

. . not complete at this stage. I will see what else is available.

[shan]

Thanks but isn’t this the same as the first dataset you shared in your first post?

[jasperblues]

@shan Yes it is the same, thought maybe you missed it. (But turns out it is only a few clicks away from the README).

I didn't release when I posted that it wasn't complete.

[shan]

Thanks @jasperblues
I am looking for a dataset that has some info about individual cases. Something you can analyze to maybe understand the pattern of how it spreads. The link I sent in my first reply does something like that.

[greg1]

@shan @jasperblues There is one with data for Israel, Taiwan and Korea here: https://github.com/jihoo-kim/Data-Science-for-COVID-19/blob/master/dataset/Patient/PatientRoute.csv.

[jasperblues]

Thanks @shan @greg1 @here please share more data sets as you find them.